VIMSS28155 has 314 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-40 126.1 6.9 1e-40 126.1 6.9 1.5 2 VIMSS28155
Domain annotation for each sequence (and alignments):
>> VIMSS28155
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 126.1 6.9 1e-40 1e-40 5 198 .. 15 234 .. 10 235 .. 0.67
2 ? -2.4 0.1 0.23 0.23 99 110 .. 269 280 .. 237 306 .. 0.48
Alignments for each domain:
== domain 1 score: 126.1 bits; conditional E-value: 1e-40
DUF262 5 lskkksgfliPdyQRgyvWdeeqvedLiedike......lrgyplGsivlwkeaededgkyeviDGQQRltTltlllka................leed 81
l + + +++P+yQR+yvWd+++ Li+d+ + +y++Gsiv+ ++++d++++v+DGQQRlt++++l + +
VIMSS28155 15 LVDAEYFYQVPNYQRPYVWDKDHLGALIDDLVVsytnnrEDEYFCGSIVI--AENPKDKRWDVVDGQQRLTSFIILACTilrlykhrlgqkskafI--- 108
55555558***********************99*****************..66777*********************987754444443333321... PP
DUF262 82 ekekeeeeklklekreedkdffekllenekeelek.leklkelngkkfkdlseeekseseknlikayelikek..................ai.eklkl 160
ee+ + ++ +e+ + +f + +++++ ++ l++l+++++ k+++ +k+ e++++++ +++e ++ e++ l
VIMSS28155 109 -----EESIYDRHDKEKERLKFLTAQNYNSIFENTvLKNLEFEDNIKKSEW---NKKFDENTYLRNAYYFRELlnesmengsisdmddfvkWFyEHIAL 199
.....2222233333333333333333333333332333333333222222...224444444444445555556666666666666655433579999 PP
DUF262 161 veielddeddedeafeiFerlNsrGvpLsaadllkall 198
++i + ++d+ a +iF++lN+rG pLs+ d+lk+ l
VIMSS28155 200 TRIICFEQDS---AMQIFQVLNDRGQPLSPIDILKSSL 234
9999997666...**********************987 PP
== domain 2 score: -2.4 bits; conditional E-value: 0.23
DUF262 99 dkdffekllene 110
+dff+ +le++
VIMSS28155 269 LEDFFNMYLEYA 280
223333333333 PP
Or compare VIMSS28155 to CDD or PaperBLAST