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Align VIMSS28284 to PF03235 (DUF262)

VIMSS28284 has 282 amino acids

Query:       DUF262  [M=199]
Accession:   PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    4.3e-40  124.1   2.0    4.3e-40  124.1   2.0    1.7  2  VIMSS28284  


Domain annotation for each sequence (and alignments):
>> VIMSS28284  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  124.1   2.0   4.3e-40   4.3e-40       3     198 ..      14     232 ..      12     233 .. 0.66
   2 ?   -0.9   0.3     0.084     0.084     112     145 ..     241     274 ..     231     280 .. 0.42

  Alignments for each domain:
  == domain 1  score: 124.1 bits;  conditional E-value: 4.3e-40
      DUF262   3 dllskkksg.fliPdyQRgyvWdeeqvedLiedike......lrgyplGsivlw...keaededgkyeviDGQQRltTltlllka.............. 77 
                 d+l     + ++iPdyQR+y W+e+++e+L++d+ +      ++gy++Gs+vl    +++e++ ++y+++DGQQRl+T++ll k+              
  VIMSS28284  14 DILATALVSyYQIPDYQRPYQWTEKNCEKLLDDLFSsyeyykESGYFCGSLVLIvinTDSETNAETYDIVDGQQRLSTFILLAKVlatlydkdldttsr 112
                 55555555568*******************************************995555555**********************65543222222222 PP

      DUF262  78 ..leedekekeeeeklkle.kreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikek...........ai..eklkl 160
                   l         e++l  +  +++ +  f+    n+k+ +        +  ++f+d ++++++++++n++k+ + +k++           +i   ++k+
  VIMSS28284 113 elL---------EKSLGDTgGEKRERLHFNAMGLNAKDDF-------VYALEHFNDSQASKNKNNKNNYLKNAICLKDYlkekeikdinaFItwLYFKV 195
                 111.........1111111111122222222222222221.......1122233333445556666666666666666666668888876445566788 PP

      DUF262 161 veielddeddedeafeiFerlNsrGvpLsaadllkall 198
                 v+i+++ + + + a +iF +lN+rG+pL a d++k +l
  VIMSS28284 196 VFIKTT-CPNVSMALRIFSVLNARGLPLHAIDVFKVEL 232
                 888777.478889*********************9876 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.084
      DUF262 112 eelekleklkelngkkfkdlseeekseseknlik 145
                 +++e l  ++ l++k +++ s+  k++++k+ ++
  VIMSS28284 241 DQEEFLSRWSALHQKCSENESKFPKRKENKREKN 274
                 3333344444444444444433333444433333 PP



Or compare VIMSS28284 to CDD or PaperBLAST