VIMSS1245013 has 216 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-36 109.8 21.2 1.3e-22 65.8 5.4 2.7 2 VIMSS1245013
Domain annotation for each sequence (and alignments):
>> VIMSS1245013
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 65.8 5.4 1.3e-22 1.3e-22 2 77 .. 14 88 .. 13 89 .. 0.95
2 ! 50.2 6.9 9.6e-18 9.6e-18 2 76 .. 100 181 .. 99 184 .. 0.79
Alignments for each domain:
== domain 1 score: 65.8 bits; conditional E-value: 1.3e-22
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvlla 77
v+ ++G++a +++G++ r+++d+fgvv ++++Ta+gGGv+RDvllg+ Pv ++ p+y++++l+ ++++++++
VIMSS1245013 14 VMFLLGIIAESMTGVISSSRRNMDAFGVVAIALTTALGGGVVRDVLLGN-LPVTIILYPHYIVICLFFSIIAIFTQ 88
56789*******************************************5.*****9999*************9976 PP
== domain 2 score: 50.2 bits; conditional E-value: 9.6e-18
Gly_transporter 2 vldaiGlaafavsGalkAlrk.....gldlfgvvvlGvv....TavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
+ld iGl+afa +G +A + ++++f v+++G+v +v+GG++RD++++ ++Pv++ +e lya++a++++++ +++
VIMSS1245013 100 ILDSIGLIAFAYIGSSIAHQIctqvfHMQFFSVLIVGIViailNGVAGGIMRDMICN-DIPVAFKSE-LYASVAAIVGAMNIIF 181
89****************9977767788888887666542222789***********.5*****666.**88887777766654 PP
Or compare VIMSS1245013 to CDD or PaperBLAST