VIMSS14303 has 207 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-50 153.5 26.1 5.9e-29 86.1 7.2 2.4 3 VIMSS14303
Domain annotation for each sequence (and alignments):
>> VIMSS14303
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 86.1 7.2 5.9e-29 5.9e-29 1 77 [. 4 79 .. 4 80 .. 0.97
2 ! 76.4 7.6 6.6e-26 6.6e-26 2 75 .. 92 163 .. 91 166 .. 0.94
3 ? -3.5 0.1 0.55 0.55 65 74 .. 175 184 .. 173 187 .. 0.54
Alignments for each domain:
== domain 1 score: 86.1 bits; conditional E-value: 5.9e-29
Gly_transporter 1 lvldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvlla 77
++ld++G+a+fa+sG+l A + ++d+fgv+vlGvvTavgGG++RD+ l++ Pv+++++p+ +++a+++++l+++l
VIMSS14303 4 YWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDH-GPVFWVKDPTDLVVAMVTSMLTIVLV 79
59***********************************************6.9*********************9985 PP
== domain 2 score: 76.4 bits; conditional E-value: 6.6e-26
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvl 75
vlda+Gla+f +G+ kA +++ ++++v++Gv+T+vgGG++RDvl++ e+P++l +e +ya+a+++g+++ +
VIMSS14303 92 VLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAR-EIPMILRTE-IYATACIIGGIVHAT 163
79**********************************************.7*****777.**********99765 PP
== domain 3 score: -3.5 bits; conditional E-value: 0.55
Gly_transporter 65 aallgallvv 74
a+++g+++++
VIMSS14303 175 ASMMGMVVTL 184
4555555555 PP
Or compare VIMSS14303 to CDD or PaperBLAST