VIMSS151019 has 205 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-47 145.0 23.6 5.1e-26 76.7 6.7 2.8 3 VIMSS151019
Domain annotation for each sequence (and alignments):
>> VIMSS151019
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 76.7 6.7 5.1e-26 5.1e-26 2 76 .. 5 78 .. 4 80 .. 0.95
2 ! 76.2 5.4 7.3e-26 7.3e-26 2 77 .. 91 164 .. 90 165 .. 0.96
3 ? -0.2 0.1 0.051 0.051 5 27 .. 174 196 .. 172 200 .. 0.81
Alignments for each domain:
== domain 1 score: 76.7 bits; conditional E-value: 5.1e-26
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
vl +iG+ a a++Gal+A r+++d fgv++++++Ta+gGG +RD+llg+ +P+ ++++p y+++++ +a+l+ ++
VIMSS151019 5 VLYLIGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGH-YPLGWVKHPEYVIIVATAAVLTTIV 78
7899********************************************6.***********99999999999876 PP
== domain 2 score: 76.2 bits; conditional E-value: 7.3e-26
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvlla 77
vlda+Gl++f+++Ga++Al++g ++++vv +v+T+v+GGvlRD++++r +P+v+ +e lya ++++ a+l+++l+
VIMSS151019 91 VLDALGLVVFSIIGAQIALDMGEGPIIAVVAAVTTGVFGGVLRDMFCKR-IPLVFQKE-LYAGISFASAVLYIALQ 164
89**********************************************5.*****777.**************987 PP
== domain 3 score: -0.2 bits; conditional E-value: 0.051
Gly_transporter 5 aiGlaafavsGalkAlrkgldlf 27
+i +++f ++ l Alr +l l
VIMSS151019 174 VISTLLFGFTARLLALRLKLGLP 196
57899999999999999988765 PP
Or compare VIMSS151019 to CDD or PaperBLAST