VIMSS17707 has 205 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-47 145.8 24.8 1.4e-26 78.5 6.1 2.7 3 VIMSS17707
Domain annotation for each sequence (and alignments):
>> VIMSS17707
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 76.0 6.7 8.5e-26 8.5e-26 2 76 .. 5 78 .. 4 80 .. 0.94
2 ! 78.5 6.1 1.4e-26 1.4e-26 2 77 .. 91 164 .. 90 165 .. 0.96
3 ? -0.8 0.1 0.082 0.082 5 27 .. 174 196 .. 172 200 .. 0.79
Alignments for each domain:
== domain 1 score: 76.0 bits; conditional E-value: 8.5e-26
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
+l ++G+ a a++Gal+A r+++d fgv++++++Ta+gGG +RD+llg+ +P+ ++++p y+++++ +a+l+ ++
VIMSS17707 5 ILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGH-YPLGWVKHPEYVIIVATAAVLTTIV 78
7889********************************************6.***********99999999999876 PP
== domain 2 score: 78.5 bits; conditional E-value: 1.4e-26
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvlla 77
vlda+Gl++f+++Ga++Al++g+ ++++vv +v+T+v+GGvlRD++++r +P+v+ +e lya ++++ a+l+++l+
VIMSS17707 91 VLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKR-IPLVFQKE-LYAGVSFASAVLYIALQ 164
89**********************************************5.*****777.**************987 PP
== domain 3 score: -0.8 bits; conditional E-value: 0.082
Gly_transporter 5 aiGlaafavsGalkAlrkgldlf 27
+i +++f + l Alr +l l
VIMSS17707 174 IISTLVFGFFARLLALRLKLGLP 196
67889999999999999888764 PP
Or compare VIMSS17707 to CDD or PaperBLAST