VIMSS5784967 has 205 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-46 142.0 25.0 3.2e-26 77.4 6.0 2.4 3 VIMSS5784967
Domain annotation for each sequence (and alignments):
>> VIMSS5784967
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 77.4 6.0 3.2e-26 3.2e-26 2 76 .. 5 78 .. 4 80 .. 0.95
2 ! 73.4 7.8 5.6e-25 5.6e-25 2 75 .. 91 162 .. 90 164 .. 0.95
3 ? -2.7 0.1 0.31 0.31 8 15 .. 178 185 .. 172 197 .. 0.50
Alignments for each domain:
== domain 1 score: 77.4 bits; conditional E-value: 3.2e-26
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
vl +iG+ a a++Gal+A r+++d+fgv++++ +Ta+gGG +RD+llg+ +P+ ++++p y+++++++a++++++
VIMSS5784967 5 VLYIIGITAEAMTGALAAGRRKMDVFGVIIIASATAIGGGSVRDILLGH-YPLGWVKHPEYIVTVACAAVITIWV 78
6889********************************************6.***********99999999999876 PP
== domain 2 score: 73.4 bits; conditional E-value: 5.6e-25
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvl 75
+ld iGl++f+++Ga++Al++++ ++++++ +v+T+ +GGvlRD+l++ ++P+v+ +e +ya +a+ +a+l++
VIMSS5784967 91 ILDSIGLMVFSIIGAQIALDMEYGPIIAAIAAVITGAFGGVLRDMLCN-TIPLVFQKE-IYAGVAFGAAWLYMG 162
89**********************************************.5*****777.************986 PP
== domain 3 score: -2.7 bits; conditional E-value: 0.31
Gly_transporter 8 laafavsG 15
+++ ++
VIMSS5784967 178 TLVAGLTA 185
22223333 PP
Or compare VIMSS5784967 to CDD or PaperBLAST