VIMSS76018 has 223 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-47 145.2 24.8 1.6e-26 78.3 6.1 2.7 3 VIMSS76018
Domain annotation for each sequence (and alignments):
>> VIMSS76018
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 75.8 6.7 1e-25 1e-25 2 76 .. 23 96 .. 22 98 .. 0.94
2 ! 78.3 6.1 1.6e-26 1.6e-26 2 77 .. 109 182 .. 108 183 .. 0.96
3 ? -1.0 0.1 0.092 0.092 5 27 .. 192 214 .. 190 218 .. 0.79
Alignments for each domain:
== domain 1 score: 75.8 bits; conditional E-value: 1e-25
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
+l ++G+ a a++Gal+A r+++d fgv++++++Ta+gGG +RD+llg+ +P+ ++++p y+++++ +a+l+ ++
VIMSS76018 23 ILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGH-YPLGWVKHPEYVIIVATAAVLTTIV 96
7889********************************************6.***********99999999999876 PP
== domain 2 score: 78.3 bits; conditional E-value: 1.6e-26
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvlla 77
vlda+Gl++f+++Ga++Al++g+ ++++vv +v+T+v+GGvlRD++++r +P+v+ +e lya ++++ a+l+++l+
VIMSS76018 109 VLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKR-IPLVFQKE-LYAGVSFASAVLYIALQ 182
89**********************************************5.*****777.**************987 PP
== domain 3 score: -1.0 bits; conditional E-value: 0.092
Gly_transporter 5 aiGlaafavsGalkAlrkgldlf 27
+i +++f + l Alr +l l
VIMSS76018 192 IISTLVFGFFARLLALRLKLGLP 214
67889999999999999888764 PP
Or compare VIMSS76018 to CDD or PaperBLAST