VIMSS7740322 has 203 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.9e-49 150.5 29.8 8.9e-29 85.6 7.1 2.6 3 VIMSS7740322
Domain annotation for each sequence (and alignments):
>> VIMSS7740322
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 85.6 7.1 8.9e-29 8.9e-29 1 76 [. 4 78 .. 4 80 .. 0.96
2 ! 74.0 10.8 3.6e-25 3.6e-25 2 75 .. 92 163 .. 91 166 .. 0.95
3 ? -0.7 0.2 0.071 0.071 14 34 .. 166 186 .. 160 191 .. 0.61
Alignments for each domain:
== domain 1 score: 85.6 bits; conditional E-value: 8.9e-29
Gly_transporter 1 lvldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
++ld++G+a+fa+sG+l A + ++d+fgv+vlGvvTavgGG++RD+ l++ P++++r+p+ +++a++++ll+++l
VIMSS7740322 4 YWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDN-GPAFWVRDPTDLVVAMVTCLLTIAL 78
59***********************************************6.9*********************987 PP
== domain 2 score: 74.0 bits; conditional E-value: 3.6e-25
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvl 75
vldaiGla+f +G+ kA ++ ++++v++Gv+T+vgGG++RDvl++ e+P++l +e +ya+a+++g+++ v
VIMSS7740322 92 VLDAIGLAVFVGIGVNKAFAASAGPMIAVCMGVITGVGGGIIRDVLAR-EIPMILRTE-IYATACIIGGIVHVT 163
79**********************************************.7*****777.***********9876 PP
== domain 3 score: -0.7 bits; conditional E-value: 0.071
Gly_transporter 14 sGalkAlrkgldlfgvvvlGv 34
+ +Al++ + l ++++lG+
VIMSS7740322 166 VTFGMALQHAMMLGMAITLGI 186
444556666666666666665 PP
Or compare VIMSS7740322 to CDD or PaperBLAST