VIMSS871196 has 203 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.4e-50 152.9 20.3 2.5e-27 80.9 5.3 2.2 2 VIMSS871196
Domain annotation for each sequence (and alignments):
>> VIMSS871196
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 80.9 5.3 2.5e-27 2.5e-27 2 77 .. 4 78 .. 3 79 .. 0.96
2 ! 78.0 7.0 2e-26 2e-26 2 76 .. 90 162 .. 89 164 .. 0.96
Alignments for each domain:
== domain 1 score: 80.9 bits; conditional E-value: 2.5e-27
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvlla 77
+l +i++ a a++Gal A r+g+d+fgvv++++vTa+gGG +RDvllg+ +P+ ++++p y++++ ++al+++++a
VIMSS871196 4 MLYLIAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGH-YPLTWVKHPEYLVLTSVAALVTIFIA 78
6789********************************************6.**********************9975 PP
== domain 2 score: 78.0 bits; conditional E-value: 2e-26
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
vlda+Gl+af+++G+++Al++g+ ++++ v Gv+T+v+GG+lRD++++ ++P+++ re lya++++++a++++l+
VIMSS871196 90 VLDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILRDIFCN-DIPLIFRRE-LYASVSFAAAWCYMLC 162
89**********************************************.5*****888.*************987 PP
Or compare VIMSS871196 to CDD or PaperBLAST