reanno::psRCH2:GFF1599 has 208 amino acids
Query: Gly_transporter [M=78]
Accession: PF03458.17
Description: Glycine transporter
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-45 139.4 27.4 3.6e-25 74.0 7.8 2.5 3 reanno::psRCH2:GFF1599
Domain annotation for each sequence (and alignments):
>> reanno::psRCH2:GFF1599
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 74.0 7.8 3.6e-25 3.6e-25 3 76 .. 7 79 .. 5 81 .. 0.94
2 ! 72.8 9.6 8.2e-25 8.2e-25 2 76 .. 92 164 .. 91 166 .. 0.95
3 ? -1.4 0.1 0.12 0.12 56 73 .. 166 184 .. 161 189 .. 0.61
Alignments for each domain:
== domain 1 score: 74.0 bits; conditional E-value: 3.6e-25
Gly_transporter 3 ldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
+ +i++ a a+sGa++++r+g+dlfg+++lG+vTa+gGG+ RDvllg+ +Pv ++ +p y++ ++ +a+++ ++
reanno::psRCH2:GFF1599 7 IYLIAITAEAMSGAIMGMRRGMDLFGICLLGTVTALGGGTARDVLLGH-YPVGWIAHPEYLTFTIGAAIVTGFI 79
6789*******************************************6.********************99776 PP
== domain 2 score: 72.8 bits; conditional E-value: 8.2e-25
Gly_transporter 2 vldaiGlaafavsGalkAlrkgldlfgvvvlGvvTavgGGvlRDvllgrevPvvllreplyalaallgallvvll 76
++d +Gl+af+v+G+ +A+ +g ++ +vv+ Gv+T+++GG++RDvl++ +vP+vl re lya++al++++++v +
reanno::psRCH2:GFF1599 92 LVDGLGLVAFTVIGCDVAMGMGAHPSIVVLAGVITGIFGGLMRDVLCN-QVPMVLQRE-LYATVALFTGVFYVGM 164
6899********************************************.5*****888.*************976 PP
== domain 3 score: -1.4 bits; conditional E-value: 0.12
Gly_transporter 56 llr.eplyalaallgallv 73
+l+ +++ a++a+lg+ +
reanno::psRCH2:GFF1599 166 WLEiNTTLATLAALGSGFL 184
5555556666666666554 PP
Or compare reanno::psRCH2:GFF1599 to CDD or PaperBLAST