PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10089315 to PF03478 (DUF295)

VIMSS10089315 has 374 amino acids

Query:       DUF295  [M=55]
Accession:   PF03478.18
Description: Protein of unknown function (DUF295)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.4e-16   46.1   0.2    3.2e-16   45.0   0.2    1.7  1  VIMSS10089315  


Domain annotation for each sequence (and alignments):
>> VIMSS10089315  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.0   0.2   3.2e-16   3.2e-16       1      54 [.     292     348 ..     292     349 .. 0.85

  Alignments for each domain:
  == domain 1  score: 45.0 bits;  conditional E-value: 3.2e-16
         DUF295   1 eevksLGdraLFlGrnssfsvsasdfgglkgNcIYFttdddee.....kdegrdigVYd 54 
                    +ev+s+Gd+aLF++ +    v+a++  g+++NcIYFt +d++        +  di+VY+
  VIMSS10089315 292 VEVESIGDEALFFDFG--ITVPADHTLGIEPNCIYFTRNDRFGhkdgsIPCLVDICVYN 348
                    79**************..889*****55********84444446788888999999999 PP



Or compare VIMSS10089315 to CDD or PaperBLAST