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Align VIMSS10101896 to PF03478 (DUF295)

VIMSS10101896 has 363 amino acids

Query:       DUF295  [M=55]
Accession:   PF03478.18
Description: Protein of unknown function (DUF295)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    6.8e-13   34.4   2.9    6.2e-12   31.3   0.1    2.9  3  VIMSS10101896  


Domain annotation for each sequence (and alignments):
>> VIMSS10101896  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.3   0.2    0.0072    0.0072      17      50 ..      37      71 ..      26      79 .. 0.65
   2 ?   -2.0   0.0      0.16      0.16       8      36 ..     176     181 ..     159     199 .. 0.66
   3 !   31.3   0.1   6.2e-12   6.2e-12       1      55 []     280     332 ..     280     332 .. 0.93

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.0072
         DUF295 17 ssfsvsasdfgglkgNcIYFt....tdddee.kdegrdi 50
                   +s + sas    +  N I ++    +   ++ +++++++
  VIMSS10101896 37 CSSWYSASRQS-VPKNQIHWLilfpE---DNnNKNNSSC 71
                   55556888754.99*******97432...3324455554 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.16
         DUF295   8 draLFlGrnssfsvsasdfgglkgNcIYF 36 
                    d+                       c+++
  VIMSS10101896 176 DW-----------------------CVFY 181
                    33.......................3443 PP

  == domain 3  score: 31.3 bits;  conditional E-value: 6.2e-12
         DUF295   1 eevksLGdraLFlGrnssfsvsasdfgglkgNcIYFttdddee.kdegrdigVYdl 55 
                    ++++sLGd++++l ++    v a+d  g+  N+IYF ++d+e+ +++ +d+++++l
  VIMSS10101896 280 RRIHSLGDESILLEQG--ITVLANDTNGFIRNSIYF-NNDCENiEKHTYDMFIFNL 332
                    589*************..889*****77********.8888889**********97 PP



Or compare VIMSS10101896 to CDD or PaperBLAST