PaperBLAST – Find papers about a protein or its homologs

 

Align G7JGG2 to PF03479 (PCC)

G7JGG2 has 296 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-26   79.5   0.1    1.8e-26   79.1   0.1    1.2  1  G7JGG2    


Domain annotation for each sequence (and alignments):
>> G7JGG2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   79.1   0.1   1.8e-26   1.8e-26       1     116 [.     104     216 ..     104     217 .. 0.92

  Alignments for each domain:
  == domain 1  score: 79.1 bits;  conditional E-value: 1.8e-26
     PCC   1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsladedgqvvgGh 97 
             r ++l+++ G+d++e++ ++ar++  r++cvls++G+v+n++   + +++      +l g+fEilslsG+++p              l+++la+ +gqvvgG 
  G7JGG2 104 RAHILEVAGGSDVFECVSTYARRR-QRGICVLSGSGTVTNVS---IRQPAAAGGVVTLHGRFEILSLSGSFLPppappgA-----TSLTIYLAGGQGQVVGGS 197
             68**********************.*****************...77778888889*****************7765442.....56**************** PP

     PCC  98 lveglvaattvevviaefe 116
             +v +l+aa++v v++a+f+
  G7JGG2 198 VVGELIAAGPVIVIAASFT 216
             **66*************97 PP



Or compare G7JGG2 to CDD or PaperBLAST