NP_177776.1 has 302 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-25 74.0 0.2 8.5e-25 73.6 0.2 1.1 1 NP_177776.1
Domain annotation for each sequence (and alignments):
>> NP_177776.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 73.6 0.2 8.5e-25 8.5e-25 1 116 [. 100 221 .. 100 222 .. 0.89
Alignments for each domain:
== domain 1 score: 73.6 bits; conditional E-value: 8.5e-25
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeye......ekellgpfEilslsGtisp......tdgepflHlhvsl 86
r +vl+++ G di+es++++ar++ r++++ls++G+v+n++l+ +++ + l g+fEilsl+Gt++p ++g l++ l
NP_177776.1 100 RSHVLEVSSGADIVESVTTYARRR-GRGVSILSGNGTVANVSLRQPATTAAHGAnggtggVVALHGRFEILSLTGTVLPppappgSGG-----LSIFL 191
68**********************.*****************66665555554466666666666******************99999.....***** PP
PCC 87 adedgqvvgGhlveglvaattvevviaefe 116
++ +gqv+gG +v lva+++v +++a+f+
NP_177776.1 192 SGVQGQVIGGNVVAPLVASGPVILMAASFS 221
*************66************997 PP
Or compare NP_177776.1 to CDD or PaperBLAST