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Align NP_181070.1 to PF03479 (DUF296)

NP_181070.1 has 285 amino acids

Query:       DUF296  [M=107]
Accession:   PF03479.15
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.4e-34  102.9   0.3    8.9e-34  102.4   0.3    1.2  1  NP_181070.1  


Domain annotation for each sequence (and alignments):
>> NP_181070.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.4   0.3   8.9e-34   8.9e-34       1     107 []     106     219 ..     106     219 .. 0.91

  Alignments for each domain:
  == domain 1  score: 102.4 bits;  conditional E-value: 8.9e-34
                  TEEEEEE-TTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEEEEECTTT......EE-S-EEEEEEEEEEEE.......TTEEEEEEEEETTSEEEEE CS
       DUF296   1 rphvlrlepGediveaieefarkrgiraacvlsaiGavsnvtrladgee......kllgrfeilslsGtilp.......dglHlhvslagedgqvvgG 85 
                  r+h+l++  G+d++e+i+++ar+r +r++cvls++G+v+nv+  + +++      +l g feilslsG++lp       +   l++ lag++gqvvgG
  NP_181070.1 106 RAHILEVGSGCDVFECISTYARRR-QRGICVLSGTGTVTNVS--IRQPTaagavvTLRGTFEILSLSGSFLPppappgaT--SLTIFLAGAQGQVVGG 198
                  68**********************.*****************..33333466888888**************99887544..6*************** PP

                  EEEEE.EEEEEEEEEEEEE-CS CS
       DUF296  86 hlaegplvaattvevvvaefeg 107
                  +++ g+l+aa++v+v++a+f++
  NP_181070.1 199 NVV-GELMAAGPVMVMAASFTN 219
                  ***.99**************85 PP



Or compare NP_181070.1 to CDD or PaperBLAST