NP_199972.1 has 419 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-28 85.9 0.5 2.3e-28 85.1 0.5 1.4 1 NP_199972.1
Domain annotation for each sequence (and alignments):
>> NP_199972.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 85.1 0.5 2.3e-28 2.3e-28 2 115 .. 180 293 .. 179 295 .. 0.90
Alignments for each domain:
== domain 1 score: 85.1 bits; conditional E-value: 2.3e-28
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvsladed 90
++vl++++Ged+ ++++f+++ ra+c+lsa+G +sn+tl+ ++ ++ + +++g+fEilsl+G+++p +g ++vsla++d
NP_199972.1 180 PHVLTVNAGEDVTMKIMTFSQQG-SRAICILSANGPISNVTLR---QSMTSGGTLTYEGHFEILSLTGSFIPsesggtrsrAGG-----MSVSLAGQD 268
8**********************.*****************44...44455556999***************987777776666.....********* PP
PCC 91 gqvvgGhlveg.lvaattvevviaef 115
g+v+gG l+ g +aa++v+v++++f
NP_199972.1 269 GRVFGGGLA-GlFIAAGPVQVMVGSF 293
*********.76************99 PP
Or compare NP_199972.1 to CDD or PaperBLAST