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Align NP_566232.1 to PF03479 (DUF296)

NP_566232.1 has 315 amino acids

Query:       DUF296  [M=107]
Accession:   PF03479.15
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.2e-35  105.8   0.3    1.3e-34  105.1   0.3    1.3  1  NP_566232.1  


Domain annotation for each sequence (and alignments):
>> NP_566232.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  105.1   0.3   1.3e-34   1.3e-34       2     107 .]     109     229 ..     108     229 .. 0.88

  Alignments for each domain:
  == domain 1  score: 105.1 bits;  conditional E-value: 1.3e-34
                  EEEEEE-TTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEE.EEECTTT.............EE-S-EEEEEEEEEEEE.......TTEEEEEEEEET CS
       DUF296   2 phvlrlepGediveaieefarkrgiraacvlsaiGavsnvt.rladgee.............kllgrfeilslsGtilp.......dglHlhvslage 78 
                   hv++++ G+d++e++++far+r +r++c+ls++G+v+nvt r    ++              l+grfeilsl+G++lp       +g  l+++lag+
  NP_566232.1 109 SHVMEIASGTDVIETLATFARRR-QRGICILSGNGTVANVTlRQP--STaavaaapggaavlALQGRFEILSLTGSFLPgpappgsTG--LTIYLAGG 201
                  7**********************.*****************5222..224466667787766666**************888887666..******** PP

                  TSEEEEEEEEEE.EEEEEEEEEEEEE-CS CS
       DUF296  79 dgqvvgGhlaegplvaattvevvvaefeg 107
                  +gqvvgG ++ gpl+aa++v++++a+f++
  NP_566232.1 202 QGQVVGGSVV-GPLMAAGPVMLIAATFSN 229
                  **********.***************985 PP



Or compare NP_566232.1 to CDD or PaperBLAST