SwissProt::A1L4X7 has 411 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-27 80.4 0.0 1.4e-26 79.4 0.0 1.6 1 SwissProt::A1L4X7
Domain annotation for each sequence (and alignments):
>> SwissProt::A1L4X7
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 79.4 0.0 1.4e-26 1.4e-26 2 116 .. 173 284 .. 172 285 .. 0.92
Alignments for each domain:
== domain 1 score: 79.4 bits; conditional E-value: 1.4e-26
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsla 87
+++++++pGed++++++ fa++ ++ cvlsa+G++sna+ + +++ + + ++g++EilslsG++++ ++g l+vsl+
SwissProt::A1L4X7 173 PHIVNIAPGEDVVQKIMMFANQS-KHELCVLSASGTISNAS---LRQPAPSGGNLPYEGQYEILSLSGSYIRteqggkSGG-----LSVSLS 255
8**********************.9999999**********...77777777789*****************766665555.....****** PP
PCC 88 dedgqvvgGhlveglvaattvevviaefe 116
+dgq++gG + + l+aa++v+v++++f+
SwissProt::A1L4X7 256 ASDGQIIGGAIGSHLTAAGPVQVILGTFQ 284
************99************985 PP
Or compare SwissProt::A1L4X7 to CDD or PaperBLAST