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Align SwissProt::Q4V3E0 to PF03479 (DUF296)

SwissProt::Q4V3E0 has 318 amino acids

Query:       DUF296  [M=107]
Accession:   PF03479.15
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    6.3e-33   99.7   0.6    8.9e-33   99.2   0.6    1.2  1  SwissProt::Q4V3E0  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q4V3E0  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.2   0.6   8.9e-33   8.9e-33       1     105 [.     124     238 ..     124     240 .. 0.93

  Alignments for each domain:
  == domain 1  score: 99.2 bits;  conditional E-value: 8.9e-33
                        TEEEEEE-TTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEEEEECTTT.....EE-S-EEEEEEEEEEEE..........TTEEEEEEEEE CS
             DUF296   1 rphvlrlepGediveaieefarkrgiraacvlsaiGavsnvtrladgee.....kllgrfeilslsGtilp..........dglHlhvslag 77 
                        +phv+++++Gedi   i++f+++   ra+c+lsa+G +snvt l + ++     +++grfeilslsG++++          +g  ++vslag
  SwissProt::Q4V3E0 124 TPHVITVNTGEDITMRIISFSQQG-PRAICILSANGVISNVT-LRQPDScggtlTYEGRFEILSLSGSFMEtenqgskgrsGG--MSVSLAG 211
                        59**********************.*****************.44444488999999****************9999999888..******* PP

                        TTSEEEEEEEEEE.EEEEEEEEEEEEE- CS
             DUF296  78 edgqvvgGhlaegplvaattvevvvaef 105
                        +dg+vvgG +a g l+aat+++vvv++f
  SwissProt::Q4V3E0 212 PDGRVVGGGVA-GLLIAATPIQVVVGSF 238
                        ***********.99************99 PP



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