SwissProt::Q4V3E0 has 318 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-29 89.1 0.3 1.8e-29 88.7 0.3 1.2 1 SwissProt::Q4V3E0
Domain annotation for each sequence (and alignments):
>> SwissProt::Q4V3E0
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.7 0.3 1.8e-29 1.8e-29 2 116 .. 125 239 .. 124 240 .. 0.90
Alignments for each domain:
== domain 1 score: 88.7 bits; conditional E-value: 1.8e-29
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhv 84
++v+++++Gedi ++ +f+++ +ra+c+lsa+G +sn+t + ++++ + +++g+fEilslsG++++ ++g ++v
SwissProt::Q4V3E0 125 PHVITVNTGEDITMRIISFSQQG-PRAICILSANGVISNVT---LRQPDSCGGTLTYEGRFEILSLSGSFMEtenqgskgrSGG-----MSV 207
8**********************.*****************...55556666679*****************887776666555.....*** PP
PCC 85 sladedgqvvgGhlveg.lvaattvevviaefe 116
sla++dg+vvgG ++ g l+aat+++vv+++f
SwissProt::Q4V3E0 208 SLAGPDGRVVGGGVA-GlLIAATPIQVVVGSFI 239
***************.77************995 PP
Or compare SwissProt::Q4V3E0 to CDD or PaperBLAST