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Align VIMSS10084638 to PF03479 (PCC)

VIMSS10084638 has 378 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.6e-26   77.4   0.2    7.8e-26   77.0   0.2    1.2  1  VIMSS10084638  


Domain annotation for each sequence (and alignments):
>> VIMSS10084638  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   77.0   0.2   7.8e-26   7.8e-26       2     115 ..     179     291 ..     178     293 .. 0.93

  Alignments for each domain:
  == domain 1  score: 77.0 bits;  conditional E-value: 7.8e-26
            PCC   2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvslad 88 
                    ++v+ +  Gedi++++ +f++++ +ra c++s++G+vs++t   + ++++++ + +++g+fEilsl G+++          t+g     l+vsl++
  VIMSS10084638 179 PHVISVGSGEDIVSKVLSFSQKR-PRALCIMSGTGTVSSVT---LREPASTTPSLTFEGRFEILSLGGSYLVneeggsksrTGG-----LSVSLSG 265
                    79*********************.*****************...67777777789*****************888888777777.....******* PP

            PCC  89 edgqvvgGhlveglvaattvevviaef 115
                    ++g+v+gG +   l+aa+ v+vv+++f
  VIMSS10084638 266 PEGHVIGGGIG-MLIAASLVQVVACSF 291
                    **********8.8***********998 PP



Or compare VIMSS10084638 to CDD or PaperBLAST