VIMSS10084639 has 361 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-24 72.2 0.1 3.3e-24 71.7 0.1 1.2 1 VIMSS10084639
Domain annotation for each sequence (and alignments):
>> VIMSS10084639
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 71.7 0.1 3.3e-24 3.3e-24 2 115 .. 162 274 .. 161 276 .. 0.93
Alignments for each domain:
== domain 1 score: 71.7 bits; conditional E-value: 3.3e-24
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvslad 88
++v+ + +Gedi++++ +f++++ +ra c++s++G++s++t + ++ ++ ++ +++gpfEi+s+ G+++ t+g l+vsl++
VIMSS10084639 162 PHVISIGAGEDIAAKVLSFSQQR-PRALCIMSGTGTISSVT---LCKPGSTDRHLTYEGPFEIISFGGSYLVneeggsrsrTGG-----LSVSLSR 248
79*********************.*****************...56677777899*****************888888887777.....******* PP
PCC 89 edgqvvgGhlveglvaattvevviaef 115
+dg++++G + l+aa v+vv+++f
VIMSS10084639 249 PDGSIIAGGVD-MLIAANLVQVVACSF 274
**********8.9***********998 PP
Or compare VIMSS10084639 to CDD or PaperBLAST