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Align VIMSS10084639 to PF03479 (DUF296)

VIMSS10084639 has 361 amino acids

Query:       DUF296  [M=107]
Accession:   PF03479.15
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-27   81.0   0.1    5.7e-27   80.5   0.1    1.2  1  VIMSS10084639  


Domain annotation for each sequence (and alignments):
>> VIMSS10084639  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.5   0.1   5.7e-27   5.7e-27       2     106 ..     162     275 ..     161     276 .. 0.92

  Alignments for each domain:
  == domain 1  score: 80.5 bits;  conditional E-value: 5.7e-27
                    EEEEEE-TTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEEEEECTTT.....EE-S-EEEEEEEEEEEE..........TTEEEEEEEEETTSEE CS
         DUF296   2 phvlrlepGediveaieefarkrgiraacvlsaiGavsnvtrladgee.....kllgrfeilslsGtilp..........dglHlhvslagedgqv 82 
                    phv+++ +Gedi++++ +f+++r  ra+c++s++G++s+vt l +  +     +++g+fei+s+ G++l           +g  l+vsl+++dg++
  VIMSS10084639 162 PHVISIGAGEDIAAKVLSFSQQR-PRALCIMSGTGTISSVT-LCKPGStdrhlTYEGPFEIISFGGSYLVneeggsrsrtGG--LSVSLSRPDGSI 253
                    8**********************.*****************.44444456677999**************999999998888..************ PP

                    EEEEEEEE.EEEEEEEEEEEEE-C CS
         DUF296  83 vgGhlaegplvaattvevvvaefe 106
                    ++G +    l+aa  v+vv+++f+
  VIMSS10084639 254 IAGGVD-M-LIAANLVQVVACSFV 275
                    *****9.5.************996 PP



Or compare VIMSS10084639 to CDD or PaperBLAST