VIMSS10091804 has 317 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-27 80.4 0.0 1.1e-26 79.8 0.0 1.3 1 VIMSS10091804
Domain annotation for each sequence (and alignments):
>> VIMSS10091804
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 79.8 0.0 1.1e-26 1.1e-26 2 115 .. 118 232 .. 117 234 .. 0.88
Alignments for each domain:
== domain 1 score: 79.8 bits; conditional E-value: 1.1e-26
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlgl.vdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsladed 90
+v+++++G+d++es++ far++ r++cvls++Gav+n+t++ ++ + +l g+fEilslsG+++p g l+++la+ +
VIMSS10091804 118 SHVMEVANGCDVMESVTVFARRR-QRGICVLSGNGAVTNVTIRQpASVPGGGSSVVNLHGRFEILSLSGSFLPppappaASG-----LTIYLAGGQ 207
79*********************.*****************765244555555688889**************776666556.....********* PP
PCC 91 gqvvgGhlveg.lvaattvevviaef 115
gqvvgG +v g l+a+++v +++a+f
VIMSS10091804 208 GQVVGGSVV-GpLMASGPVVIMAASF 232
*********.77***********998 PP
Or compare VIMSS10091804 to CDD or PaperBLAST