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Align VIMSS10092518 to PF03479 (PCC)

VIMSS10092518 has 315 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    3.9e-27   81.2   0.2    8.9e-27   80.0   0.1    1.6  2  VIMSS10092518  


Domain annotation for each sequence (and alignments):
>> VIMSS10092518  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.26      0.26      76      91 ..      26      41 ..      10      43 .. 0.75
   2 !   80.0   0.1   8.9e-27   8.9e-27       2     116 ..     109     228 ..     108     229 .. 0.88

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.26
            PCC 76 gepflHlhvsladedg 91
                   ++p lH+++ +a ++g
  VIMSS10092518 26 KKPDLHISMNMAMDSG 41
                   4599999999998766 PP

  == domain 2  score: 80.0 bits;  conditional E-value: 8.9e-27
            PCC   2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeye.....ekellgpfEilslsGtisp......tdgepflHlhvsl 86 
                     +v++++ G d++e+l++far++  r++c+ls++G+v+n+tl+  ++ +            l+g+fEilsl+G+++p      + g     l+++l
  VIMSS10092518 109 SHVMEIASGTDVIETLATFARRR-QRGICILSGNGTVANVTLRQPSTAAVAAApggaaVLALQGRFEILSLTGSFLPgpappgSTG-----LTIYL 198
                    79*********************.*****************6666655555557777677777**************777766556.....***** PP

            PCC  87 adedgqvvgGhlveg.lvaattvevviaefe 116
                    a+ +gqvvgG +v g l+aa++v +++a+f+
  VIMSS10092518 199 AGGQGQVVGGSVV-GpLMAAGPVMLIAATFS 228
                    *************.77***********9997 PP



Or compare VIMSS10092518 to CDD or PaperBLAST