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Align VIMSS10092520 to PF03479 (DUF296)

VIMSS10092520 has 309 amino acids

Query:       DUF296  [M=107]
Accession:   PF03479.15
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      4e-30   90.7   0.1    9.3e-30   89.5   0.1    1.5  1  VIMSS10092520  


Domain annotation for each sequence (and alignments):
>> VIMSS10092520  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   89.5   0.1   9.3e-30   9.3e-30       1     106 [.     172     284 ..     172     284 .. 0.92

  Alignments for each domain:
  == domain 1  score: 89.5 bits;  conditional E-value: 9.3e-30
                    TEEEEEE-TTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEEEEECTTT......EE-S-EEEEEEEEEEEE.......TTEEEEEEEEETTSEEE CS
         DUF296   1 rphvlrlepGediveaieefarkrgiraacvlsaiGavsnvtrladgee......kllgrfeilslsGtilp.......dglHlhvslagedgqvv 83 
                    +ph+++++pGed+v++i+ fa++   +++cvlsa+G++sn++  + +++       ++g++eilslsG++++       +g  l+vsl+ +dgq++
  VIMSS10092520 172 TPHIVNIAPGEDVVQKIMMFANQS-KHELCVLSASGTISNAS--LRQPApsggnlPYEGQYEILSLSGSYIRteqggksGG--LSVSLSASDGQII 262
                    59**********************.*****************..44444566888889**************999998877..************* PP

                    EEEEEEE.EEEEEEEEEEEEE-C CS
         DUF296  84 gGhlaegplvaattvevvvaefe 106
                    gG + +  l+aa++v+v++++f+
  VIMSS10092520 263 GGAIGSH-LTAAGPVQVILGTFQ 284
                    *****66.************995 PP



Or compare VIMSS10092520 to CDD or PaperBLAST