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Align VIMSS10097918 to PF03479 (DUF296)

VIMSS10097918 has 310 amino acids

Query:       DUF296  [M=107]
Accession:   PF03479.15
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.6e-30   90.5   1.3    6.3e-30   90.0   1.3    1.2  1  VIMSS10097918  


Domain annotation for each sequence (and alignments):
>> VIMSS10097918  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   1.3   6.3e-30   6.3e-30       2     105 ..     117     228 ..     116     230 .. 0.89

  Alignments for each domain:
  == domain 1  score: 90.0 bits;  conditional E-value: 6.3e-30
                    EEEEEE-TTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEEEEECTTT......EE-S-EEEEEEEEEEEE........TTEEEEEEEEETTSEEE CS
         DUF296   2 phvlrlepGediveaieefarkrgiraacvlsaiGavsnvtrladgee......kllgrfeilslsGtilp........dglHlhvslagedgqvv 83 
                     hvl++++G d++e++++far+r  r+++vls++G v+nvt  + +++      +l g+feils+ G++lp         g  l+++lag++gqvv
  VIMSS10097918 117 SHVLEIATGADVAESLNAFARRR-GRGVSVLSGSGLVTNVT--LRQPAasggvvSLRGQFEILSMCGAFLPtsgspaaaAG--LTIYLAGAQGQVV 207
                    69*********************.*****************..33333466888888**************8776665555..************* PP

                    EEEEEEE.EEEEEEEEEEEEE- CS
         DUF296  84 gGhlaegplvaattvevvvaef 105
                    gG +a gpl+a+++v v++a+f
  VIMSS10097918 208 GGGVA-GPLIASGPVIVIAATF 228
                    *****.**************99 PP



Or compare VIMSS10097918 to CDD or PaperBLAST