VIMSS10098857 has 318 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-29 89.1 0.3 1.8e-29 88.7 0.3 1.2 1 VIMSS10098857
Domain annotation for each sequence (and alignments):
>> VIMSS10098857
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.7 0.3 1.8e-29 1.8e-29 2 116 .. 125 239 .. 124 240 .. 0.90
Alignments for each domain:
== domain 1 score: 88.7 bits; conditional E-value: 1.8e-29
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvslad 88
++v+++++Gedi ++ +f+++ +ra+c+lsa+G +sn+t + ++++ + +++g+fEilslsG++++ ++g ++vsla+
VIMSS10098857 125 PHVITVNTGEDITMRIISFSQQG-PRAICILSANGVISNVT---LRQPDSCGGTLTYEGRFEILSLSGSFMEtenqgskgrSGG-----MSVSLAG 211
8**********************.*****************...55556666679*****************887776666555.....******* PP
PCC 89 edgqvvgGhlveg.lvaattvevviaefe 116
+dg+vvgG ++ g l+aat+++vv+++f
VIMSS10098857 212 PDGRVVGGGVA-GlLIAATPIQVVVGSFI 239
***********.77************995 PP
Or compare VIMSS10098857 to CDD or PaperBLAST