VIMSS10101377 has 292 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-26 79.5 0.1 1.3e-26 79.5 0.1 1.5 2 VIMSS10101377
Domain annotation for each sequence (and alignments):
>> VIMSS10101377
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.3 0.1 0.6 0.6 77 89 .. 19 31 .. 7 38 .. 0.71
2 ! 79.5 0.1 1.3e-26 1.3e-26 1 116 [. 110 222 .. 110 223 .. 0.92
Alignments for each domain:
== domain 1 score: -3.3 bits; conditional E-value: 0.6
PCC 77 epflHlhvslade 89
+p lHlh + +
VIMSS10101377 19 RPDLHLHHNSSSD 31
3889999776665 PP
== domain 2 score: 79.5 bits; conditional E-value: 1.3e-26
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsladed 90
r ++l++ +G+d++++++++ar++ r++cvls++G+v+n++ + +++ +l+g+fEilslsG+++p l++ la+ +
VIMSS10101377 110 RAHILEVTNGCDVFDCVATYARRR-QRGICVLSGSGTVTNVS---IRQPSAAGAVVTLQGTFEILSLSGSFLPppappgA-----TSLTIFLAGGQ 196
68**********************.*****************...77778888889*****************7765442.....56********* PP
PCC 91 gqvvgGhlveglvaattvevviaefe 116
gqvvgG +v +l+aa++v v++a+f+
VIMSS10101377 197 GQVVGGSVVGELTAAGPVIVIAASFT 222
*********66*************97 PP
Or compare VIMSS10101377 to CDD or PaperBLAST