VIMSS10101980 has 324 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.6e-27 81.8 0.0 3.7e-27 81.2 0.0 1.3 1 VIMSS10101980
Domain annotation for each sequence (and alignments):
>> VIMSS10101980
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 81.2 0.0 3.7e-27 3.7e-27 1 116 [. 133 248 .. 133 249 .. 0.93
Alignments for each domain:
== domain 1 score: 81.2 bits; conditional E-value: 3.7e-27
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsladed 90
r++v+++ +G+d++es+++far++ r++cv+s++G v+n+t++ + + +l g+fEilslsG+++p g l+v+la+ +
VIMSS10101980 133 RTHVMEIGDGCDLVESVATFARRR-QRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPppapptATG-----LSVYLAGGQ 222
79**********************.*****************99998888888899999**************776665445.....********* PP
PCC 91 gqvvgGhlveg.lvaattvevviaefe 116
gqvvgG +v g l a++v v++a+f+
VIMSS10101980 223 GQVVGGSVV-GpLLCAGPVVVMAASFS 248
*********.77999*********997 PP
Or compare VIMSS10101980 to CDD or PaperBLAST