VIMSS10102262 has 404 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-27 81.6 0.2 4.4e-27 81.0 0.2 1.3 1 VIMSS10102262
Domain annotation for each sequence (and alignments):
>> VIMSS10102262
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 81.0 0.2 4.4e-27 4.4e-27 2 115 .. 168 281 .. 167 283 .. 0.89
Alignments for each domain:
== domain 1 score: 81.0 bits; conditional E-value: 4.4e-27
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvslad 88
++vl +++Ged+ ++++f+++ ra+c+lsa+G +sn+tl+ ++ ++ + +++g+fEilsl+G++++ +g ++v+la+
VIMSS10102262 168 PHVLIVNAGEDVTMKIMTFSQQG-SRAICILSANGPISNVTLR---QSMTSGGTLTYEGRFEILSLTGSFMQndsggtrsrAGG-----MSVCLAG 254
8**********************.*****************44...44455556999***************887776665555.....******* PP
PCC 89 edgqvvgGhlveg.lvaattvevviaef 115
+dg+v+gG l+ g aa++v+v++++f
VIMSS10102262 255 PDGRVFGGGLA-GlFLAAGPVQVMVGTF 281
***********.76999*********98 PP
Or compare VIMSS10102262 to CDD or PaperBLAST