VIMSS10109406 has 276 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.1e-24 70.9 0.0 1e-23 70.1 0.0 1.4 1 VIMSS10109406
Domain annotation for each sequence (and alignments):
>> VIMSS10109406
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 70.1 0.0 1e-23 1e-23 2 116 .. 85 203 .. 84 204 .. 0.88
Alignments for each domain:
== domain 1 score: 70.1 bits; conditional E-value: 1e-23
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp...........tdgepflHlhvsl 86
+++l+++ G d++e++++f+r++ ++cvls++G+v+n+tl+ + + ++++ g+f +ls+s t++p + ++vsl
VIMSS10109406 85 PYILEVPSGNDVVEAINRFCRRK-SIGVCVLSGSGSVANVTLRQPSP-AALGSTITFHGKFDLLSVSATFLPppprtslsppvS-----NFFTVSL 173
79*********************.8899*************666653.3334699999**************999977544433.....56***** PP
PCC 87 adedgqvvgGhlveg.lvaattvevviaefe 116
a+++gq++gG ++ g l+ a+tv v++a+f+
VIMSS10109406 174 AGPQGQIIGGFVA-GpLISAGTVYVIAASFN 203
*************.77*************98 PP
Or compare VIMSS10109406 to CDD or PaperBLAST