VIMSS10110837 has 404 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-26 79.7 0.3 1.6e-26 79.2 0.3 1.3 1 VIMSS10110837
Domain annotation for each sequence (and alignments):
>> VIMSS10110837
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 79.2 0.3 1.6e-26 1.6e-26 2 115 .. 162 275 .. 161 277 .. 0.91
Alignments for each domain:
== domain 1 score: 79.2 bits; conditional E-value: 1.6e-26
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvslad 88
++ ++++ Ged+ +++ ++++ ra+c+lsa+G++sn+t + ++++ + +++g+fEilslsG+++p +g +++sla+
VIMSS10110837 162 THQFTVNGGEDVTMKVMPYSQQG-SRAICILSATGSISNVT---LGQPTNAGGTLTYEGRFEILSLSGSFMPtenggtkgrAGG-----MSISLAG 248
78999******************.*****************...66777777789*****************887776555545.....******* PP
PCC 89 edgqvvgGhlveg.lvaattvevviaef 115
++g+++gG l+ g l+aa++v+vv+++f
VIMSS10110837 249 PNGNIFGGGLA-GmLIAAGPVQVVMGSF 275
***********.66***********998 PP
Or compare VIMSS10110837 to CDD or PaperBLAST