VIMSS1215756 has 200 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-25 74.7 0.0 5.8e-25 74.1 0.0 1.3 1 VIMSS1215756
Domain annotation for each sequence (and alignments):
>> VIMSS1215756
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 74.1 0.0 5.8e-25 5.8e-25 5 113 .. 7 106 .. 4 110 .. 0.88
Alignments for each domain:
== domain 1 score: 74.1 bits; conditional E-value: 5.8e-25
PCC 5 lrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisptdgepflHlhvsladedgqvvgGhlveg 101
l+le G+d+l+sl+++a++e + ++vls++G +s a+++ k e +++++++Ei++l+Gtisp ++ +Hlh+sl+d +++v++Ghl eg
VIMSS1215756 7 LQLESGSDLLNSLQALATKE-NKLGYVLSVVGNLSIAKFQCPG---KG-EATTVKNHLEIIGLNGTISP-NK---CHLHISLSDGECKVWAGHLEEG 94
79******************.9****************55554...44.4458888*************.77...9********************* PP
PCC 102 lvaattvevvia 113
+++ + + i+
VIMSS1215756 95 TIILKGADLLIG 106
998877777765 PP
Or compare VIMSS1215756 to CDD or PaperBLAST