VIMSS124362 has 285 amino acids
Query: PCC [M=117] Accession: PF03479.19 Description: Plants and Prokaryotes Conserved (PCC) domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-19 56.0 0.0 7.2e-13 35.2 0.1 2.2 2 VIMSS124362 Domain annotation for each sequence (and alignments): >> VIMSS124362 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.7 0.0 9e-08 9e-08 5 106 .. 28 136 .. 25 143 .. 0.80 2 ! 35.2 0.1 7.2e-13 7.2e-13 1 114 [. 178 284 .. 178 285 .] 0.92 Alignments for each domain: == domain 1 score: 18.7 bits; conditional E-value: 9e-08 PCC 5 lrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeye.........ekellgpfEilslsGtisptdgepflHlhvsladedgqv 93 l+++pG +le++ e ++e g+++a++ Ga++ +v+ + ++ + + +g+ i l+ t+ + dgepflH h + edg VIMSS124362 28 LTFKPGRSVLEAVHEALAETGCDSAMIEVRGGAFAPLA--YVTPTLSD-DgihaawysdIHAPDGRAPIEDLVMTFGRRDGEPFLHGHGVWRHEDGLR 122 6899***********************88888998888..44444333.3244656555444459999999999************************ PP PCC 94 vgGhlveg.lvaat 106 +Gh++++ + a VIMSS124362 123 AAGHVMPKdSQFAE 136 *****977565444 PP == domain 2 score: 35.2 bits; conditional E-value: 7.2e-13 PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisptdge..pflHlhvsladedgqvvgG 96 r +++rl+p+e i+ ++e+ a+e+gi+ a++ ++iG++ +t ++dg+ e + E+l Gt+sp d + ++ l +++ d +++++ G VIMSS124362 178 RAVLCRLKPNEPIHPAIERTAAEHGIERATL-HGIGSLVGCT--FADGQVME------SAASELLIRKGTLSP-DRSgqAKAKLDIAIVDTECTIFEG 265 56789**************************.**********..99999888......7799***********.4444599***************** PP PCC 97 hlveg.lvaattvevviae 114 ++ g ++ t ev i+e VIMSS124362 266 EIAYGvDAVCITFEVLIVE 284 *****777899****9986 PP
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