VIMSS188324 has 134 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-39 120.9 0.1 2.1e-39 120.7 0.1 1.0 1 VIMSS188324
Domain annotation for each sequence (and alignments):
>> VIMSS188324
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 120.7 0.1 2.1e-39 2.1e-39 1 117 [] 6 119 .. 6 119 .. 0.98
Alignments for each domain:
== domain 1 score: 120.7 bits; conditional E-value: 2.1e-39
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisptdgepflHlhvsladedgqvvgGhl 98
rv+++r+++G++i+e l+efa++e+i+ +++ saiG+++n +g++ +eek+y+e++l+g++E+lslsG+is++dg+pf+H hv+l+d++g+++gGhl
VIMSS188324 6 RVYLFRIPEGKEIIEFLREFAEKENIKVGII-SAIGTLRNPVIGYFMEEEKKYKEISLTGTYELLSLSGNISLKDGKPFVHAHVVLGDSEGRAFGGHL 102
799****************************.****************************************************************** PP
PCC 99 veglvaattvevviaefeg 117
v+g v +++ev+++e+eg
VIMSS188324 103 VRGEV--FVAEVFVQELEG 119
***99..9********985 PP
Or compare VIMSS188324 to CDD or PaperBLAST