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Align VIMSS55933 to PF03479 (PCC)

VIMSS55933 has 130 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.5e-32   98.6   0.9    1.8e-32   98.4   0.9    1.0  1  VIMSS55933  


Domain annotation for each sequence (and alignments):
>> VIMSS55933  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.4   0.9   1.8e-32   1.8e-32       3     115 ..       5     109 ..       3     111 .. 0.94

  Alignments for each domain:
  == domain 1  score: 98.4 bits;  conditional E-value: 1.8e-32
         PCC   3 fvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisptdgepflHlhvsladedgqvvgGhlveg 101
                 ++lrl +G d+ +++ ++++++ i+a+++ s++G++s  +++l+d  ++     ++  pfEilslsGt++  ++   +Hlh+++ad++g+v+gGhl+eg
  VIMSS55933   5 IALRLTRGMDLKQQIVQLVQQHRIHAGSIASCVGCLSTLHIRLADSVSTL----QVSAPFEILSLSGTLTY-QH---CHLHIAVADAQGRVWGGHLLEG 95 
                 789*****************************************977777....8999*************.77...9********************* PP

         PCC 102 lvaattvevviaef 115
                 + + tt+e++i  +
  VIMSS55933  96 NLINTTAELMIHHY 109
                 777********876 PP



Or compare VIMSS55933 to CDD or PaperBLAST