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Align XP_003590926.1 to PF03479 (DUF296)

XP_003590926.1 has 329 amino acids

Query:       DUF296  [M=107]
Accession:   PF03479.15
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-28   85.9   0.7    2.3e-28   85.0   0.1    1.7  2  XP_003590926.1  


Domain annotation for each sequence (and alignments):
>> XP_003590926.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   85.0   0.1   2.3e-28   2.3e-28       2     105 ..     111     222 ..     110     223 .. 0.92
   2 ?   -3.3   0.0      0.67      0.67      77      86 ..     270     279 ..     264     283 .. 0.76

  Alignments for each domain:
  == domain 1  score: 85.0 bits;  conditional E-value: 2.3e-28
                     EEEEEE-TTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEE.EEECTTT......EE-S-EEEEEEEEEEEE.......TTEEEEEEEEETTSEE CS
          DUF296   2 phvlrlepGediveaieefarkrgiraacvlsaiGavsnvt.rladgee......kllgrfeilslsGtilp.......dglHlhvslagedgqv 82 
                     +h+++++pGedi + i+ +++k++  ++c+lsa+G++s++t r   +++      +++grf+i+sl+G++++       +g  l+v+l+ +dgq 
  XP_003590926.1 111 IHFVTVAPGEDIGQNIMMLMQKNSRCEMCILSASGSISSATlR---QPAtsggniTYEGRFDIISLTGSYVRneldgrsGG--LSVCLSHSDGQL 200
                     79***************************************42...333366889999**************999998877..************ PP

                     EEEEEEEE.EEEEEEEEEEEEE- CS
          DUF296  83 vgGhlaegplvaattvevvvaef 105
                     vgG +a gpl+aa++v+v++++f
  XP_003590926.1 201 VGGSIA-GPLKAASPVQVIAGTF 222
                     ******.**************99 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.67
                     ETTSEEEEEE CS
          DUF296  77 gedgqvvgGh 86 
                     ++++qv+gG 
  XP_003590926.1 270 NKEHQVIGGS 279
                     4569999995 PP



Or compare XP_003590926.1 to CDD or PaperBLAST