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Align XP_017223772.1 to PF03479 (PCC)

XP_017223772.1 has 263 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.7e-28   83.4   0.2      1e-27   83.1   0.2    1.2  1  XP_017223772.1  


Domain annotation for each sequence (and alignments):
>> XP_017223772.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   83.1   0.2     1e-27     1e-27       1     116 [.      64     176 ..      64     177 .. 0.91

  Alignments for each domain:
  == domain 1  score: 83.1 bits;  conditional E-value: 1e-27
             PCC   1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvslade 89 
                     r +v++++ G d++es+++far++  r++cvls++G+v n+t   + +++       l g+fEilsl+G ++p      + g     l+v+la+ 
  XP_017223772.1  64 RSHVMEIASGADVAESIAQFARRR-QRGVCVLSGSGSVINVT---LRQPAAPGAVVALHGTFEILSLTGAFLPgpappgSTG-----LTVYLAGG 149
                     68**********************.*****************...66667777779999**************777766556.....******** PP

             PCC  90 dgqvvgGhlveglvaattvevviaefe 116
                     +gqvvgG++v  lvaa+++ +++a+f 
  XP_017223772.1 150 QGQVVGGCVVGSLVAAGPIMIIAATFA 176
                     **********66***********9996 PP



Or compare XP_017223772.1 to CDD or PaperBLAST