XP_017226816.1 has 322 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-20 59.6 0.2 1.3e-11 31.1 0.1 2.2 2 XP_017226816.1
Domain annotation for each sequence (and alignments):
>> XP_017226816.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.6 0.0 3.2e-10 3.2e-10 2 105 .. 66 166 .. 65 178 .. 0.83
2 ! 31.1 0.1 1.3e-11 1.3e-11 3 112 .. 208 317 .. 207 321 .. 0.83
Alignments for each domain:
== domain 1 score: 26.6 bits; conditional E-value: 3.2e-10
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisptdge..pflHlhvsladedgqvv 94
+++l++++G d+++ + ++a + + ++l ++G v +a l+ + ++ +++++p+ ++++sG ++ ++++ p + + v+l++ +g +v
XP_017226816.1 66 TVILKVPRGVDLIDWVVSYASSK-KAHLTILCGSGNVLRADLSHMGSQAP---PITFTEPLSLITMSGMFLFSGSKdgPLALFNVTLGRLSGDIV 156
5799*******************.7777788**********777765555...59*****************544467***********99**** PP
PCC 95 gGhlveglvaa 105
G v+ ++
XP_017226816.1 157 SGTAVSM-ITM 166
**99944.323 PP
== domain 2 score: 31.1 bits; conditional E-value: 1.3e-11
PCC 3 fvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.......tdgepflHlhvsladed 90
+vl +epG d++++l +far + +vl ++G vs++ + ++++ + +lg+f+i+s+sGt + + vs+ ++
XP_017226816.1 208 VVLSFEPGTDVIKALVQFARYY-SLNFSVLCCSGLVSEVD---IGNSRSHPLSVDVLGNFQIISFSGTCNGrvansldD---IQKSFVVSMVSQN 295
799*******************.7777788**********...55555666689999***********99888776430...5555888888888 PP
PCC 91 gqvvgGhlveglvaattvevvi 112
G +v+ ++aa+ v vv+
XP_017226816.1 296 NVLTNGTVVKSMKAASYVTVVA 317
8888999999999999998886 PP
Or compare XP_017226816.1 to CDD or PaperBLAST