XP_017232768.1 has 295 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-29 87.4 0.1 1.6e-28 85.6 0.0 1.8 2 XP_017232768.1
Domain annotation for each sequence (and alignments):
>> XP_017232768.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.9 0.0 0.11 0.11 48 73 .. 62 87 .. 51 100 .. 0.74
2 ! 85.6 0.0 1.6e-28 1.6e-28 1 115 [. 118 229 .. 118 231 .. 0.93
Alignments for each domain:
== domain 1 score: -0.9 bits; conditional E-value: 0.11
PCC 48 geekeyeekellgpfEilslsGtisp 73
+e++ ++++ ++ E++s++G+ s+
XP_017232768.1 62 NNENNGNHNTSADDKELVSFNGSESE 87
455555577777899*****999766 PP
== domain 2 score: 85.6 bits; conditional E-value: 1.6e-28
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvslade 89
r +v+++++G+di es+ +fa+++ r++c+ls++G+v+n+t +++++ ++l+g+fEilslsG+++p g l+++la+
XP_017232768.1 118 RSHVMEVANGCDIQESISTFATRR-QRGVCILSGSGTVTNVT---LKQPAAPGAVITLQGRFEILSLSGSFLPppappaASG-----LTIYLAGG 203
68**********************.*****************...8888888899******************776666556.....******** PP
PCC 90 dgqvvgGhlveglvaattvevviaef 115
+gqvvgG +v +l+a+++v +++a+f
XP_017232768.1 204 QGQVVGGGVVGQLIASGPVVIMAASF 229
**********66***********998 PP
Or compare XP_017232768.1 to CDD or PaperBLAST