XP_017234499.1 has 281 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-27 80.8 0.1 1.2e-26 79.6 0.0 1.6 2 XP_017234499.1
Domain annotation for each sequence (and alignments):
>> XP_017234499.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.2 0.0 0.27 0.27 57 71 .. 54 68 .. 35 76 .. 0.66
2 ! 79.6 0.0 1.2e-26 1.2e-26 1 115 [. 101 212 .. 101 214 .. 0.92
Alignments for each domain:
== domain 1 score: -2.2 bits; conditional E-value: 0.27
PCC 57 ellgpfEilslsGti 71
+ + E++sl+G+
XP_017234499.1 54 SRIDGKELVSLNGSE 68
333567999999985 PP
== domain 2 score: 79.6 bits; conditional E-value: 1.2e-26
PCC 1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvslade 89
r ++++++ G+di es+ +fa ++ r++c+ls++G+v n+t +++++ ++l+g+fEilslsG+++p l++ la++
XP_017234499.1 101 RSHIMEIASGCDIQESVSSFASKR-QRGVCILSGNGTVMNVT---LKQPAAPGGIITLQGRFEILSLSGSFLPppappgA-----SCLTIHLAGS 186
689*********************.*****************...8888888889******************7776543.....55******** PP
PCC 90 dgqvvgGhlveglvaattvevviaef 115
+gqvvgG ++ +l+a+++v +++a+f
XP_017234499.1 187 QGQVVGGSVAGQLIASGPVVIMAASF 212
**********66***********998 PP
Or compare XP_017234499.1 to CDD or PaperBLAST