XP_017236315.1 has 345 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.5e-27 80.1 0.0 1.2e-26 79.6 0.0 1.2 1 XP_017236315.1
Domain annotation for each sequence (and alignments):
>> XP_017236315.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 79.6 0.0 1.2e-26 1.2e-26 2 115 .. 162 274 .. 161 276 .. 0.92
Alignments for each domain:
== domain 1 score: 79.6 bits; conditional E-value: 1.2e-26
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp........tdgepflHlhvslad 88
++v++++pGedi++++ +fa+++ +ra c+lsa+G+vs +t + ++ + + +++g+fEil lsG++++ t+g l+vs++
XP_017236315.1 162 PHVIQIAPGEDIASKILAFAQQR-PRALCILSANGSVSAVT---LRQPMSADSTFTYEGRFEILCLSGSYLLseggprnrTGG-----LSVSICT 247
8**********************.*****************...6666677777999***************88888887777.....******* PP
PCC 89 edgqvvgGhlveglvaattvevviaef 115
+dg v+gG + l+aa+ v+ ++++f
XP_017236315.1 248 PDGLVIGGAIGGRLIAASLVQAIVCSF 274
***********55***********998 PP
Or compare XP_017236315.1 to CDD or PaperBLAST