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Align XP_017237852.1 to PF03479 (DUF296)

XP_017237852.1 has 271 amino acids

Query:       DUF296  [M=107]
Accession:   PF03479.15
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-30   90.4   0.1    6.5e-30   90.0   0.1    1.2  1  XP_017237852.1  


Domain annotation for each sequence (and alignments):
>> XP_017237852.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.0   0.1   6.5e-30   6.5e-30       2     106 ..      98     206 ..      97     207 .. 0.92

  Alignments for each domain:
  == domain 1  score: 90.0 bits;  conditional E-value: 6.5e-30
                     EEEEEE-TTSBHHHHHHHHHHHHT-SSEEEEEEEEEEEEEEEEECTTT.......EE-S-EEEEEEEEEEEE...TTEEEEEEEEETTSEEEEEE CS
          DUF296   2 phvlrlepGediveaieefarkrgiraacvlsaiGavsnvtrladgee.......kllgrfeilslsGtilp...dglHlhvslagedgqvvgGh 86 
                     p+vl++++G+di+ ++++f+r+r  +++c+ls++G+vsnvt  +++++       ++ gr+++ls+s+tilp   ++  ++++lag++gq+vgG 
  XP_017237852.1  98 PYVLEIPAGSDIIHTVTTFCRRR-NSGLCILSGSGMVSNVT--LKQPSttpgatvTFHGRLDMLSISATILPnlaNS--FTITLAGPQGQIVGGA 187
                     89*********************.*****************..434434677888999**************88777..**************** PP

                     EEEE.EEEEEEEEEEEEE-C CS
          DUF296  87 laegplvaattvevvvaefe 106
                      + +plvaa+tv v++a+f+
  XP_017237852.1 188 AV-APLVAASTVYVIAASFN 206
                     **.99*************97 PP



Or compare XP_017237852.1 to CDD or PaperBLAST