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Align XP_017238682.1 to PF03479 (PCC)

XP_017238682.1 has 453 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-25   74.9   1.4      5e-25   74.4   1.4    1.3  1  XP_017238682.1  


Domain annotation for each sequence (and alignments):
>> XP_017238682.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   74.4   1.4     5e-25     5e-25       2     116 ..     275     388 ..     274     389 .. 0.91

  Alignments for each domain:
  == domain 1  score: 74.4 bits;  conditional E-value: 5e-25
             PCC   2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvsla 87 
                     ++++ ++pG d+l++l +f++ +  +++cvlsa+G+++++tl+  +g+       +++g+fEilsl+G+++          t+g     l+vsla
  XP_017238682.1 275 PHIIVVQPGMDVLARLVSFSQVR-AQTVCVLSATGSIASVTLQQSSGSGM----VTYEGRFEILSLVGSFLVtesgihqgrTGG-----LSVSLA 359
                     89*********************.*****************555555554....5999**************999999888888.....****** PP

             PCC  88 dedgqvvgGhlveg.lvaattvevviaefe 116
                      +dg+v+gG ++ g l+aa++v+v++++f+
  XP_017238682.1 360 APDGSVLGGRVA-GlLIAASPVQVIVGTFN 388
                     ************.77************997 PP



Or compare XP_017238682.1 to CDD or PaperBLAST