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Align XP_017243846.1 to PF03479 (PCC)

XP_017243846.1 has 264 amino acids

Query:       PCC  [M=117]
Accession:   PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.1e-21   61.5   0.7    7.4e-21   60.9   0.7    1.3  1  XP_017243846.1  


Domain annotation for each sequence (and alignments):
>> XP_017243846.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.9   0.7   7.4e-21   7.4e-21       1     116 [.      78     188 ..      78     189 .. 0.90

  Alignments for each domain:
  == domain 1  score: 60.9 bits;  conditional E-value: 7.4e-21
             PCC   1 rvfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvslade 89 
                     r +vl++++G di+e+l+e+ar+   ++++v+s+ G+vsn++++ v           l+g fEil+lsG ++p       +g     l+++la+ 
  XP_017243846.1  78 RCHVLEVAAGTDIVECLNEYARRG-EKGVFVMSGRGTVSNVNIRQVP-----SGIVALQGGFEILGLSGAVLPapvptgAGG-----LSIILAGG 161
                     679*********************.9****************66664.....3356789*****************998888.....******** PP

             PCC  90 dgqvvgGhlveg.lvaattvevviaefe 116
                     +gq++gG +v g l+a   v +++a f+
  XP_017243846.1 162 QGQMLGGIVV-GpLIATEKVVLIAAVFP 188
                     **********.77**9999999988886 PP



Or compare XP_017243846.1 to CDD or PaperBLAST