XP_017244339.1 has 359 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-29 88.6 0.4 2.8e-29 88.1 0.4 1.3 1 XP_017244339.1
Domain annotation for each sequence (and alignments):
>> XP_017244339.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.1 0.4 2.8e-29 2.8e-29 2 115 .. 173 286 .. 172 288 .. 0.93
Alignments for each domain:
== domain 1 score: 88.1 bits; conditional E-value: 2.8e-29
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp.........tdgepflHlhvsla 87
++++ ++ Ged+ +++++f+++ +ra+c+lsa+Ga+sn+t +++ +++ + +++g+f ilslsG++++ t+g l+vsl+
XP_017244339.1 173 PHIIDVKVGEDVSSKIMAFSQNG-PRAVCILSANGAISNVT---LHQAATSGGTATYEGRFDILSLSGSFLLsevggqrsrTGG-----LSVSLS 258
89*******************99.*****************...55666666679*******************9999999888.....****** PP
PCC 88 dedgqvvgGhlveg.lvaattvevviaef 115
++dg+v+gG+++ g l+aa++v+v++++f
XP_017244339.1 259 GPDGRVLGGCVA-GlLTAASPVQVIVGSF 286
************.77************98 PP
Or compare XP_017244339.1 to CDD or PaperBLAST