XP_017255185.1 has 283 amino acids
Query: PCC [M=117]
Accession: PF03479.19
Description: Plants and Prokaryotes Conserved (PCC) domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.4e-25 73.8 0.2 1.8e-24 72.5 0.0 1.7 2 XP_017255185.1
Domain annotation for each sequence (and alignments):
>> XP_017255185.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 72.5 0.0 1.8e-24 1.8e-24 2 116 .. 104 216 .. 103 217 .. 0.90
2 ? -1.8 0.0 0.21 0.21 86 106 .. 255 274 .. 252 276 .. 0.71
Alignments for each domain:
== domain 1 score: 72.5 bits; conditional E-value: 1.8e-24
PCC 2 vfvlrlepGedilesleefareegiraacvlsaiGavsnatlglvdgeekeyeekellgpfEilslsGtisp......tdgepflHlhvsladed 90
++vl++++G+d++ +++ +++++ ++ cvl+++G+v+n+t l + +++ + ++ g+f +lsls ti++ t+ +++sla+++
XP_017255185.1 104 PYVLEIPAGSDLIHAITLYCKKR-QSGLCVLNGSGTVANVT--LKQPSSTPNATVTFHGRFDMLSLSATIILpslqhvTNT-----FTISLAGPQ 190
79*********************.*****************..444445555599*****************876666555.....********* PP
PCC 91 gqvvgGhlveg.lvaattvevviaefe 116
gqvvgG +v g lvaa+tv +++a+f+
XP_017255185.1 191 GQVVGGAVV-GpLVAASTVYIIAASFN 216
*********.77************997 PP
== domain 2 score: -1.8 bits; conditional E-value: 0.21
PCC 86 ladedgqvvgGhlveglvaat 106
+++ g ++ Gh + v++t
XP_017255185.1 255 VSGG-GDMYSGHSMGNEVIWT 274
5666.999****995455565 PP
Or compare XP_017255185.1 to CDD or PaperBLAST