C0ND33 has 291 amino acids
Query: TMEM33_Pom33 [M=240]
Accession: PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-34 105.7 3.5 1.8e-34 105.3 3.5 1.1 1 C0ND33
Domain annotation for each sequence (and alignments):
>> C0ND33
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 105.3 3.5 1.8e-34 1.8e-34 13 236 .. 17 266 .. 12 268 .. 0.87
Alignments for each domain:
== domain 1 score: 105.3 bits; conditional E-value: 1.8e-34
TMEM33_Pom33 13 vvanklelalwlarlltvlftvlyilplflssesas.....aYykallanaatsalrLhqrl.pqvqlsr...eflqrllledschyLlysliFlfs 100
+ a++l++ ++l +l+++l+++ y+l ++ + +s Y+ a++++aat+ +++++ + ++ +l + +l +++++yL+ +l++l+s
C0ND33 17 MLAQTLQFGWFLGHLALILSVFRYFLSYITFN-YYSgmaraSYRFAFVSAAATYGIVVYKAYiARGRLGGsipATAMKLAGDENVQYLFMALVWLYS 112
78899*********************655542.33345666899****************987666766511245678999**************** PP
TMEM33_Pom33 101 apvtlallPvalfallHaasytltlld...................llgsnslvvarllislvesqsqniLkliAlsEivlmpllivllllg.rasl 177
+ + +allP+a+++++H+a+yt+t l ++++++a+ + +v+ + + l+A E+ lm+ li ++l++ ++s
C0ND33 113 RQIPIALLPFAIYSVFHVATYTRTYLIptlqppkpaapgeatspsgRPVTKQSPLAESIGRFVKRYYDASMGLVAAFEMSLMFRLIGSALTFsSGSW 209
**************************99************99988744444455677778**************************99887615689 PP
TMEM33_Pom33 178 ltpliYyqfLslRYsSrrnPytrnafselrilleklankpscPavirklieklislvsr 236
++++iY+ f + RY+ ++ + +++ +++++ ++++++P+ +r+ e +lv +
C0ND33 210 VLLVIYFCFFRSRYA--QSSFVQGTVARASARIDAAISHQNTPPQVRQGWEVFKGLVRQ 266
99*************..*******************************99988888865 PP
Or compare C0ND33 to CDD or PaperBLAST