NP_060596.2 has 247 amino acids
Query: TMEM33_Pom33 [M=240] Accession: PF03661.17 Description: Transmembrane protein 33/Nucleoporin POM33 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.2e-104 334.2 12.6 2.6e-104 333.9 12.6 1.0 1 NP_060596.2 Domain annotation for each sequence (and alignments): >> NP_060596.2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 333.9 12.6 2.6e-104 2.6e-104 7 240 .] 12 245 .. 7 245 .. 0.99 Alignments for each domain: == domain 1 score: 333.9 bits; conditional E-value: 2.6e-104 TMEM33_Pom33 7 eslkqhvvanklelalwlarlltvlftvlyilplflssesasaYykallanaatsalrLhqrlpqvqlsreflqrllledschyLlysliFlfsapv 103 + ++q++++nkl++a+wl+rl+tv++++l++lpl++ +e+as+Y++allana+tsalrLhqrlp++qlsr+fl+++lledschyLlysliF++s+pv NP_060596.2 12 AGAVQFMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLPHFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPV 108 5689********************************************************************************************* PP TMEM33_Pom33 104 tlallPvalfallHaasytltlldllgsnslvvarllislvesqsqniLkliAlsEivlmpllivllllgraslltpliYyqfLslRYsSrrnPytr 200 t++++Pv+lf+llHaa+yt+++ld gsnsl++ r ++++++++qniLk+iA++Ei+lmp+++++l++g++sll+p+iYy+fL+lRYsSrrnPy+r NP_060596.2 109 TMSIFPVLLFSLLHAATYTKKVLDARGSNSLPLLRSVLDKLSANQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRFLTLRYSSRRNPYCR 205 ************************************************************************************************* PP TMEM33_Pom33 201 nafselrilleklankpscPavirklieklislvsrlapp 240 ++f+elri++e++++kp+cP ++r+l+ ++i+++srlap+ NP_060596.2 206 TLFNELRIVVEHIIMKPACPLFVRRLCLQSIAFISRLAPT 245 **************************************95 PP
Or compare NP_060596.2 to CDD or PaperBLAST