Q12144 has 273 amino acids
Query: TMEM33_Pom33 [M=240]
Accession: PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.5e-19 54.6 22.1 7.8e-19 54.1 22.1 1.1 1 Q12144
Domain annotation for each sequence (and alignments):
>> Q12144
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.1 22.1 7.8e-19 7.8e-19 13 235 .. 18 265 .. 9 268 .. 0.82
Alignments for each domain:
== domain 1 score: 54.1 bits; conditional E-value: 7.8e-19
TMEM33_Pom33 13 vvanklelalwlarlltvlftvlyilplflssesasaYykallanaatsalrLhqrl..pqvqlsreflqrllle.dschyLlysli.Flfsa...p 102
+++++ ++ +++ ++lt+++++++ l + +++++ s+Y++ l +t+a++L+q + q++++ l + ++ d+ +y+ +i Fl+s+
Q12144 18 SRIKQPQFYWFIGHFLTIFNFIQFHLSITSKQNQLSCYRRSLFYISVTYAIVLYQFFksDQLKFNFTLLRQEMKKlDNLQYFAMLFIlFLLSQfniI 114
5677889************************************************875477888888887665544*****9776661555542223 PP
TMEM33_Pom33 103 vtlallPvalfallHaasytltlld............llgsnslvvarllislvesqsqniLkliAlsEi..vlmpllivllllgras........l 177
++ +l ++f+++H+++y+++ l ll s+ +v+++ + q ++++++i + +l+p+ ++lll+ ra+ +
Q12144 115 ISGSLYSPVIFSIFHFLNYFKENLLpflpliplnlknLLNSKITVFIQNY-NGFFLQMAQVFEIICGLRVglFLVPFNFFLLLVRRANvsfevvgtM 210
456788888************99999***999888776777777666666.5555677778999997766669*********999985333333326 PP
TMEM33_Pom33 178 ltpliYyqfLslRYsSrrnPytrnafselrilleklankpscPavirklieklislvs 235
l+ l Y f +lRY ++ ++r++f++ ++l+++++++ +P+ ++l ++ ++v+
Q12144 211 LAGLTYVWFFKLRYL--QSESMRQIFKQYVLRLDAYVSRT-LPPYCSRLWNGYKNFVM 265
88999**********..********************998.99999999999999986 PP
Or compare Q12144 to CDD or PaperBLAST